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                <text>: structure learning, graphical models, greedy search, exact search, scoring algorithm, GLM, graph theory</text>
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                <text>The R package abn is designed to fit additive Bayesian network models to observational datasets and contains routines to score Bayesian networks based on Bayesian or&#13;
information theoretic formulations of generalized linear models. It is equipped with exact&#13;
search and greedy search algorithms to select the best network, and supports continuous,&#13;
discrete and count data in the same model and input of prior knowledge at a structural&#13;
level. The Bayesian implementation supports random effects to control for one-layer clustering. In this paper, we give an overview of the methodology and illustrate the package’s&#13;
functionality using a veterinary dataset concerned with respiratory diseases in commercial&#13;
swine production.</text>
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                <text>University of Zurich&#13;
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                <text>The R package BiDAG implements Markov chain Monte Carlo (MCMC) methods for&#13;
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search for a maximum a posteriori (MAP) graph and to sample graphs from the posterior&#13;
distribution given the data. A new hybrid approach to structure learning enables inference&#13;
in large graphs. In the first step, we define a reduced search space by means of the PC&#13;
algorithm or based on prior knowledge. In the second step, an iterative order MCMC&#13;
scheme proceeds to optimize the restricted search space and estimate the MAP graph.&#13;
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MCMC. The models and algorithms can handle both discrete and continuous data. The&#13;
BiDAG package also provides an implementation of MCMC schemes for structure learning&#13;
and sampling of dynamic Bayesian networks.&#13;
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                <text>Polina Suter</text>
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                <text>https://www.jstatsoft.org/article/view/v105i09</text>
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                <text>ETH Zürich</text>
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                <text> cglasso, conditional Gaussian graphical models, glasso, high-dimensionality, sparsity, censoring, missing data.</text>
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                <text>Sparse graphical models have revolutionized multivariate inference. With the advent&#13;
of high-dimensional multivariate data in many applied fields, these methods are able to&#13;
detect a much lower-dimensional structure, often represented via a sparse conditional&#13;
independence graph. There have been numerous extensions of such methods in the past&#13;
decade. Many practical applications have additional covariates or suffer from missing or&#13;
censored data. Despite the development of these extensions of sparse inference methods&#13;
for graphical models, there have been so far no implementations for, e.g., conditional&#13;
graphical models.&#13;
Here we present the general-purpose package cglasso for estimating sparse conditional&#13;
Gaussian graphical models with potentially missing or censored data. The method employs an efficient expectation-maximization estimation of an ℓ1-penalized likelihood via a&#13;
block-coordinate descent algorithm. The package has a user-friendly data manipulation&#13;
interface. It estimates a solution path and includes various automatic selection algorithms&#13;
for the two ℓ1 tuning parameters, associated with the sparse precision matrix and sparse&#13;
regression coefficients, respectively. The package pays particular attention to the visualization of the results, both by means of marginal tables and figures, and of the inferred&#13;
conditional independence graphs.&#13;
This package provides a unique and computational efficient implementation of a conditional Gaussian graphical model that is able to deal with the additional complications of&#13;
missing and censored data. As such it constitutes an important contribution for empirical&#13;
scientists wishing to detect sparse structures in high-dimensional data.</text>
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                <text>https://www.jstatsoft.org/article/view/v105i01</text>
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                <text>University of Palermo</text>
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                <text>Fajar Bagus W</text>
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modular neural network building system based on the deep learning library TensorFlow&#13;
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                <text>: statnet, ERGM, exponential-family random graph models, valued networks.</text>
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                <text>The ergm package supports the statistical analysis and simulation of network data. It&#13;
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in Journal of Statistical Software in 2008. This article provides an overview of the new&#13;
functionality in the 2021 release of ergm version 4. These include more flexible handling of&#13;
nodal covariates, term operators that extend and simplify model specification, new models&#13;
for networks with valued edges, improved handling of constraints on the sample space of&#13;
networks, and estimation with missing edge data. We also identify the new packages in the&#13;
statnet suite that extend ergm’s functionality to other network data types and structural&#13;
features and the robust set of online resources that support the statnet development&#13;
process and applications.</text>
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                <text>Despite the large body of research on missing value distributions and imputation, there&#13;
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and impute missing values in data. This paper addresses this gap. The new methodology&#13;
builds upon tidy data principles, with the goal of integrating missing value handling as a&#13;
key part of data analysis workflows. We define a new data structure, and a suite of new&#13;
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                <text>logit, utility, preference, willingness to pay, discrete choice models, R, maximum&#13;
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                <text>This paper introduces the logitr R package for fast maximum likelihood estimation of&#13;
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to a chosen distribution. The package is faster than other similar packages such as mlogit,&#13;
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“willingness-to-pay (WTP) space” parameterizations, allowing for the direct estimation of&#13;
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mixed logit models. The paper provides a discussion of some of the implications of each&#13;
utility parameterization for WTP estimates. It also highlights some of the design features&#13;
that enable logitr’s performant estimation speed and includes a benchmarking exercise&#13;
with similar packages. Finally, the paper highlights additional features that are designed&#13;
specifically for WTP space models, including a consistent user interface for specifying&#13;
models in either space and a parallelized multi-start optimization loop, which is particularly useful for searching the solution space for different local minima when estimating&#13;
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event of interest during follow-up. The R package reReg offers a comprehensive collection&#13;
of practical and easy-to-use tools for regression analysis of recurrent events, possibly with&#13;
the presence of an informative terminal event. The regression framework is a general scalechange model which encompasses the popular Cox-type model, the accelerated rate model,&#13;
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through a subject-specific frailty without any need for parametric specification. Different&#13;
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options, including categorical variable analysis (cat_analysis()), continuous variable&#13;
analysis (cont_analysis()), relative risk analysis (relrisk_analysis()), attributable&#13;
risk analysis (attrisk_analysis()), difference in risk analysis (diffrisk_analysis()),&#13;
change analysis (change_analysis()), and trend analysis (trend_analysis()). In this&#13;
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balanced GRTS algorithm yields more precise parameter estimates than simple random&#13;
sampling, which ignores spatial information.&#13;
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measurements from a jump-diffusion process, jumpdiff is able to retrieve the evolution&#13;
equation producing data series statistically equivalent to the series of measurements. The&#13;
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expressed from the series of Kramers-Moyal coefficients. Additionally, the library is also&#13;
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