“Optimal cutpoints” for binary classification tasks are often established by testing
which cutpoint yields the best discrimination, for example the Youden index, in a specific
sample. This results in “optimal” cutpoints that are highly variable and…
Gene expression data provide an abundant resource for inferring connections in gene
regulatory networks. While methodologies developed for this task have shown success, a
challenge remains in comparing the performance among methods. Gold-standard…
An increasing number of time-consuming simulators exhibit a complex noise structure
that depends on the inputs. For conducting studies with limited budgets of evaluations,
new surrogate methods are required in order to simultaneously model the mean…
We present mexhaz, an R package for fitting flexible hazard-based regression models
with the possibility to add time-dependent effects of covariates and to account for a twolevel hierarchical structure in the data through the inclusion of a normally…
Multivariate time series observations are increasingly common in multiple fields of
science but the complex dependencies of such data often translate into intractable models
with large number of parameters. An alternative is given by first reducing…